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#11
The maximal FAT32 volume size is 2 terabytes with a sector size of 512 bytes and the maximum FAT32 volume size is 16 TB with a sector size of 4,096 bytes.
Samuria is right FAT32 does not include direct built-in support for long filenames, but FAT32 volumes can optionally hold a VFAT for long filenames in addition to short filenames in exactly the same way as VFAT long filenames have been optionally implemented for FAT12 and FAT16 volumes.
AOMEI can do NTFS->FAT32 and FAT32->NTFS, you do not specify which operation you used.
I'm sorry that I cannot bring a solution to your problem, It looks like Aomei NTFS to FAT32 had problems dealing with the VFAT on your Drive and if the drive is converted to FAT32, I'm pretty sure there is no remnant of the converted MFT left.
In the other Case then Aomei had problem converting the VFAT to MFT and the same situation occurred with the current MFT.
You should have performed this on a copy of your drive "in case" something goes wrong.
The safest way to do this (The only way I do it): is to use another drive format it and copy the files from the other file system to it.
This way there is absolutely no chances that you will end loosing anything.