chiko said:
Confirmed and unexpected.
I fixed mine by creating an innocuous bat with
Code:
copy con tst.bat
dir /s
^Z
I clicked it while running to pause and set the CMD properties to match what a default Command window was and it worked.
Aha, that's the way to do it. Just need to figure out how to hold each console window open in order to make the change. Fixed the .bat console and the Python console so far :)

Thanks, that was almost too easy...